Amyloid Atlas Amyloid Atlas 2020

Illustrations of Amyloid Fibril structures deposited in the Protein Data Bank. Click on thumbnails below to see high resolution images of the amyloid fibril colored by residue or energy.
Or download the complete atlas: colored by residue (pptx) or colored by energy (pptx)

Protein
Residues Ordered
Method
Resolution (Å)
Residue Map
Energy Map
PDB ID
Reference
Amyloid-β(1-42)

17-42

ssNMR

N/A

2beg

Lührs et al., 2005

Amyloid-β(1-40) Iowa Mutation D23N

15-40

ssNMR

N/A

2lnq

Qiang et al., 2012

Amyloid-β(1-40) (+)stagger

9-40

ssNMR

N/A

2lmn

Paravastu et al., 2008

Amyloid-β(1-40) (-)stagger

9-40

ssNMR

N/A

2lmo

Paravastu et al., 2008

Amyloid-β(1-40) (+)stagger

9-40

ssNMR

N/A

2lmp

Paravastu et al., 2008

Amyloid-β(1-40) (-)stagger

9-40

ssNMR

N/A

2lmq

Paravastu et al., 2008

Amyloid-β(1-40) Iowa Mutation D23N

15-40

ssNMR

N/A

2mpz

Sgourakis et al., 2015

Amyloid-β(1-40) Alzheimer Brain Seeded

1-40

ssNMR

N/A

2m4j

Lu et al., 2013

Amyloid-β(1-42)

16-40

CryoEM

5.0

5aef

Schmidt et al., 2015

Amyloid-β(20-34)(L-isoAsp23)

20-34

MicroED

1.1

6nb9

Warmack et al., 2019

Amyloid-β(20-34)

20-34

MicroED

1.1

6oiz

Warmack et al., 2019

Amyloid-β(1-42)

11-42

ssNMR

N/A

2mxu

Xiao et al., 2015

Amyloid-β(1-42)

14-42

ssNMR

N/A

5kk3

Colvin et al., 2016

Amyloid-β(1-42)

14-42

ssNMR

N/A

2nao

Wälti et al., 2016

Amyloid-β(1-40) E22Δ Osaka mutation

1-40

ssNMR

N/A

2mvx

Schütz et al., 2015

Amyloid-β(1-42)

1-42

cryoEM

4.0

5oqv

Gremer et al., 2017

Amyloid-β, Alzheimer brain derived

1-40

cryoEM

4.4

6shs

Kollmer et al., 2019

α-synuclein wt

43-97

ssNMR

N/A

2na0

Tuttle et al., 2016

α-synuclein H50Q

36-99

cryoEM

3.3

6peo

Boyer et al., 2019

α-synuclein H50Q

36-99

cryoEM

3.6

6pes

Boyer et al., 2019

α-synuclein rod polymorph

38-97

cryoEM

3.5

6cu7

Li et al., 2018

α-synuclein N-acetylated, 1-122

39-97

cryoEM

3.0

6osl

Ni et al., 2019

α-synuclein N-acetylated, 1-103

37-96

cryoEM

3.4

6osm

Ni et al., 2019

α-synuclein N-acetylated, 1-140

37-97

cryoEM

2.8

6osj

Ni et al., 2019

α-synuclein

37-99

cryoEM

3.1

6a6b

Li et al., 2018

α-synuclein

43-83

cryoEM

3.6

6cu8

Li et al., 2018

α-synuclein polymorph 2b

9-24, 35-93

cryoEM

3.5

6rtb

Guerrero-Ferreira et al., 2019

α-synuclein polymorph 2a

14-25, 36-95

cryoEM

3.1

6rt0

Guerrero-Ferreira et al., 2019

β-2-microglobulin

22-85

cryoEM

3.9

6gk3

Iadanza et al., 2018

β-2-microglobulin

20-41

ssNMR

N/A

2e8d

Iwata et al., 2006

CA150 WW2 Domain

3-33

ssNMR

N/A

2nnt

Ferguson et al., 2006

FUS LC Domain

37-97

ssNMR

N/A

5w3n

Murray et al., 2017

Glucagon

1-29

ssNMR

N/A

6nzn

Gelenter et al., 2019

HET-s (218-289)

224-283

ssNMR

N/A

2rnm

Wasmer et al., 2008

Light Chain λ6, Antibody

1-37, 66-105

cryoEM

3.3

6hud

Swuec et al., 2019

Light Chain λ1, Antibody

15-105

cryoEM

4.0

6ic3

Radamaker et al., 2019

RIPK1+RIPK3

448-462, 532-549

ssNMR

N/A

5v7z

Mompeán et al., 2018

Serum Amyloid A, murine

1-69

cryoEM

3.0

6dso

Liberta et al., 2019

Serum Amyloid A, human

2-55

cryoEM

2.7

6mst

Liberta et al., 2019

SH3 Domain of PI3-kinase

1-77

cryoEM

3.4

6r4r

Röder et al., 2019

Tau Paired Helical Filament (PHF), Alzheimer's Disease

306-378

cryoEM

3.4

5o3l

Fitzpatrick et al., 2017

Tau Straight Filament (PHF), Alzheimer's Disease

306-378

cryoEM

3.4

5o3t

Fitzpatrick et al., 2017

Tau, Pick's Disease

254-378 Δ275-305

cryoEM

3.2

6gx5

Falcon et al., 2018

Tau, Chronic Traumatic Encephalopathy (CTE), Type 1

305-379

cryoEM

2.3

6nwp

Falcon et al., 2019

Tau, Chronic Traumatic Encephalopathy (CTE), Type 2

305-379

cryoEM

3.4

6nwq

Falcon et al., 2019

Tau 4R, Snake Polymorph, Heparin Induced

272-330

cryoEM

3.3

6qjh

Zhang et al., 2019

Tau 4R, Twister Polymorph, Heparin Induced

274-292, 304-321

cryoEM

3.3

6qjm

Zhang et al., 2019

Tau 4R, Jagged Polymorph, Heparin Induced

274-290, 304-321

cryoEM

3.5

6qjp

Zhang et al., 2019

Tau 3R, Heparin Induced

272-330 Δ275-305

cryoEM

3.5

6qjq

Zhang et al., 2019

TDP-43 (247-257)

247-257

cryoEM

3.7

5w7v

Guenther et al., 2018

TDP-43 (311-360)

312-347

cryoEM

3.8

6n37

Cao et al., 2019

TDP-43 (311-360)

312-352

cryoEM

3.8

6n3b

Cao et al., 2019

TDP-43 (311-360)

311-360

cryoEM

3.3

6n3a

Cao et al., 2019

TDP-43 A315E (286-331)

288-319

cryoEM

3.3

6n3c

Cao et al., 2019