Many bacteria that are potentially pathogenic actually spend much of their time inhabiting
human organs in a relatively benign state. Neisseria meningitidis is generally a commensal
bacterium inside the nasopharynx of humans. However, it is capable of invading the mucosal
epithelium and producing fatal meningitis and sepsis. In fact, N. meningitidis remains a
significant worldwide health problem since it is responsible for thousands of deaths each
year in Africa. N. meningitidis contains NmDsbA1, NmDsbA2 and NmDsbA3,
which are three specific DsbA oxidoreductases that are vital for the oxidative folding of
many membrane and secreted proteins. Therefore, removal of DsbA from N. Meningitidis
is associated with loss of virulence. Among the three N. meningitidis DsbAs,
NmDsbA1 and NmDsbA2 are lipoproteins anchored to the inner cell membrane; they
share 78% amino acid sequence identity. NmDsbA3 is more divergent from NmDsbA1
and NmDsbA2 in that it only shares 57% and 51% amino acid sequence identity with the
latter two proteins, respectively (1,2).
The structure of NmDsbA1 is highly similar to known DsbA structures from other
bacteria, especially E. coli. The DsbA fold is an extension of the thioredoxin superfamily and
has two domains: a thioredoxin domain and a helical domain. The thioredoxin domain comprises
a β-sheet (strands β2, β3, β4 and β5) flanked by helices α1, α7 and
the C-terminal portion of α6.
The helical domain which is inserted into the thioredoxin domain consists
of helices α2, α3, α4, α
and the N-terminal portion of α6 (Figure 1). NmDsbA1 crystallized with six molecules in the
asymmetric unit and all of them are nearly identical with root-mean-square distance (rmsd)
values over all Cα positions for each chain compared to chain A ranging from 0.39 Å to 0.54 Å (1).
The molecules are arranged as head to tail repeats related by 180°. The head to tail arrangement
allows the N-terminus of one protein to bind the peptide-binding cleft of a neighboring molecule.
The N-terminal peptide region comprises vector-derived residues -4 to -1 (Asp-Asp-Asp-Lys).
This charged sequence makes a series of polar and non-polar contacts within the
binding cleft (Figure 2).
The reactive disulfide from NmDsbA1 can be found in each of the
six crystal copies. However, the active-site cysteines are modeled in different conformations
because the two conformations of the active-site cysteines are consistent with the presence of
both reduced NmDsbA1 and oxidized NmDsbA1 in the crystal (Figure 3). Even though the
function of NmDsbA1 has not been elucidated fully, it is believed that NmDsbA1 depends on a pair
of reactive cysteines separated by two residues (the CPHC motif) in order to invade the host.
Therefore, future work could focus on the disulfide bonds between cysteines for the purpose of
deactivating NmDsbA1.
References
(1) Vivian, J.P.,et al. (2009). Structure and function of the oxidoreductase DsbA1 from
Neisseria meningtdis, J. Mol. Biol. doi:10.1016/j.jmb.2009.09.065
(2) Sinha, S.et al. (2008). Reduced DNA binding and uptake in the absence of DsbA1 and
DsbA2 of Neisseria meningitidis due to inefficient folding of the outer-membrane secretin
PilQ. Microbiology 154, 217-225
(3) PDB code: 3A3T
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Figure 1: A cartoon diagram of the structure of NmDsbA1 is shown.
The alpha helices, beta sheets and C/N terminus are labeled.
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Figure 2: Asp-4 (in red), Asp-3 (in blue), Asp-2 (in yellow) and Lys (in orange) are shown
in stick format. These 4 residues create a charged N-terminus and enable neighboring molecules to be connected.
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Figure 3: An animation illustrates the active-site comprised of two cysteines, a proline
and a histidine (CPHC motif) of NmDsbA1.
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